Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkd1Q99MH6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkd1Q99MH6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkd1Q99MH6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkd1Q99MH6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkd1Q99MH6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkd1Q99MH6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkd1Q99MH6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Gm4995-201ENSMUST00000117247 432 ntBASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Gm44487-201ENSMUST00000205145 325 ntBASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Dupd1-202ENSMUST00000224735 548 ntBASIC12.86□□□□□ -0.35
Nkd1Q99MH6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkd1Q99MH6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Gm11594-201ENSMUST00000122313 162 ntBASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.85□□□□□ -0.35
Nkd1Q99MH6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Gm43474-201ENSMUST00000196415 774 ntBASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Gm43514-201ENSMUST00000198852 424 ntBASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Gm6916-202ENSMUST00000205523 195 ntBASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkd1Q99MH6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms