Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Gm2991-201ENSMUST00000173338 480 ntBASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Gm29608-201ENSMUST00000190444 463 ntBASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Gm15370-201ENSMUST00000117158 253 ntBASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Gm14381-201ENSMUST00000122105 414 ntBASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Gm26927-201ENSMUST00000182385 965 ntBASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Gm10146-201ENSMUST00000072739 309 ntBASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Gm26315-201ENSMUST00000083890 321 ntBASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx6-1Q99MA9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Gm37922-201ENSMUST00000195596 455 ntBASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Gm37497-201ENSMUST00000195830 798 ntBASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms