Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm43514-201ENSMUST00000198852 424 ntBASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Gm15653-201ENSMUST00000119247 907 ntBASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Gm21470-201ENSMUST00000187680 696 ntBASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap3Q99LM2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Gm6415-201ENSMUST00000118488 348 ntBASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Gm14822-201ENSMUST00000122247 291 ntBASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Gm11594-201ENSMUST00000122313 162 ntBASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Gm24513-201ENSMUST00000174964 138 ntBASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Gm7774-201ENSMUST00000200064 533 ntBASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Shd-206ENSMUST00000225145 998 ntBASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap3Q99LM2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms