Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Gm10156-201ENSMUST00000122364 462 ntBASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Cts7-204ENSMUST00000225321 1257 ntBASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf1Q99LC2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Gm4271-201ENSMUST00000174444 973 ntBASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Gm6334-201ENSMUST00000207083 228 ntBASIC13.61□□□□□ -0.23
Cstf1Q99LC2 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms