Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.06■□□□□ 0.16
Col20a1Q923P0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.05■□□□□ 0.16
Col20a1Q923P0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Gm12742-201ENSMUST00000117326 410 ntBASIC16.05■□□□□ 0.16
Col20a1Q923P0 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.05■□□□□ 0.16
Col20a1Q923P0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.05■□□□□ 0.16
Col20a1Q923P0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col20a1Q923P0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.04■□□□□ 0.16
Col20a1Q923P0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.04■□□□□ 0.16
Col20a1Q923P0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.04■□□□□ 0.16
Col20a1Q923P0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.04■□□□□ 0.16
Col20a1Q923P0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col20a1Q923P0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.03■□□□□ 0.16
Col20a1Q923P0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Gm12957-201ENSMUST00000117835 377 ntBASIC16.03■□□□□ 0.16
Col20a1Q923P0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col20a1Q923P0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Gm27331-201ENSMUST00000183705 60 ntBASIC16.03■□□□□ 0.16
Col20a1Q923P0 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.03■□□□□ 0.16
Col20a1Q923P0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col20a1Q923P0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.03■□□□□ 0.16
Col20a1Q923P0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms