Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm5425-201ENSMUST00000214125 459 ntBASIC15.75■□□□□ 0.11
Smc1bQ920F6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Gm2495-201ENSMUST00000191160 466 ntBASIC15.74■□□□□ 0.11
Smc1bQ920F6 Gm7561-201ENSMUST00000211203 886 ntBASIC15.74■□□□□ 0.11
Smc1bQ920F6 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.74■□□□□ 0.11
Smc1bQ920F6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.74■□□□□ 0.11
Smc1bQ920F6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.73■□□□□ 0.11
Smc1bQ920F6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.73■□□□□ 0.11
Smc1bQ920F6 Gm27847-201ENSMUST00000183711 107 ntBASIC15.73■□□□□ 0.11
Smc1bQ920F6 Gm27375-201ENSMUST00000183799 107 ntBASIC15.73■□□□□ 0.11
Smc1bQ920F6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Gm8463-201ENSMUST00000208573 613 ntBASIC15.73■□□□□ 0.11
Smc1bQ920F6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.73■□□□□ 0.11
Smc1bQ920F6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.73■□□□□ 0.11
Smc1bQ920F6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc1bQ920F6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.72■□□□□ 0.11
Smc1bQ920F6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.72■□□□□ 0.11
Smc1bQ920F6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Gm7287-201ENSMUST00000205267 602 ntBASIC15.72■□□□□ 0.11
Smc1bQ920F6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms