Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Gm21147-201ENSMUST00000186046 913 ntBASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb3Q91XZ7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Pcdhb3Q91XZ7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb3Q91XZ7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb3Q91XZ7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb3Q91XZ7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb3Q91XZ7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb3Q91XZ7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb3Q91XZ7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Rpph1-201ENSMUST00000175096 319 ntBASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Gm9726-201ENSMUST00000180321 678 ntBASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Gm8502-201ENSMUST00000185708 901 ntBASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Gm8510-201ENSMUST00000189202 895 ntBASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Gm2316-201ENSMUST00000190613 921 ntBASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb3Q91XZ7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Defa-ps4-201ENSMUST00000118021 183 ntBASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Gm16198-201ENSMUST00000118766 670 ntBASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 CT009495.1-201ENSMUST00000224221 862 ntBASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms