Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Gm28760-201ENSMUST00000185995 736 ntBASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Gm19078-201ENSMUST00000206311 727 ntBASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Gm5161-201ENSMUST00000075243 853 ntBASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb6Q91XZ4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm12403-201ENSMUST00000121384 959 ntBASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm26464-201ENSMUST00000157094 305 ntBASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms