Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.51□□□□□ -0.25
Usb1Q91W78 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Usb1Q91W78 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.51□□□□□ -0.25
Usb1Q91W78 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Gm2445-201ENSMUST00000182798 989 ntBASIC13.51□□□□□ -0.25
Usb1Q91W78 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Usb1Q91W78 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.51□□□□□ -0.25
Usb1Q91W78 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Usb1Q91W78 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.51□□□□□ -0.25
Usb1Q91W78 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.51□□□□□ -0.25
Usb1Q91W78 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Usb1Q91W78 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.51□□□□□ -0.25
Usb1Q91W78 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.51□□□□□ -0.25
Usb1Q91W78 Paupar-201ENSMUST00000194826 3482 ntBASIC13.51□□□□□ -0.25
Usb1Q91W78 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Usb1Q91W78 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.51□□□□□ -0.25
Usb1Q91W78 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usb1Q91W78 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Usb1Q91W78 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Usb1Q91W78 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.5□□□□□ -0.25
Usb1Q91W78 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.5□□□□□ -0.25
Usb1Q91W78 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.5□□□□□ -0.25
Usb1Q91W78 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.5□□□□□ -0.25
Usb1Q91W78 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.5□□□□□ -0.25
Usb1Q91W78 Gm28631-201ENSMUST00000190740 334 ntBASIC13.5□□□□□ -0.25
Usb1Q91W78 Gm18027-201ENSMUST00000218947 619 ntBASIC13.5□□□□□ -0.25
Usb1Q91W78 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Usb1Q91W78 Mir497b-201ENSMUST00000093601 125 ntBASIC13.5□□□□□ -0.25
Usb1Q91W78 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Usb1Q91W78 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Usb1Q91W78 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.5□□□□□ -0.25
Usb1Q91W78 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Usb1Q91W78 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.5□□□□□ -0.25
Usb1Q91W78 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.5□□□□□ -0.25
Usb1Q91W78 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Usb1Q91W78 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usb1Q91W78 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Usb1Q91W78 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usb1Q91W78 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usb1Q91W78 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usb1Q91W78 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usb1Q91W78 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Usb1Q91W78 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Usb1Q91W78 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.49□□□□□ -0.25
Usb1Q91W78 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms