Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Gm3436-201ENSMUST00000179930 840 ntBASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Gm4804-201ENSMUST00000182234 999 ntBASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H1fooQ8VIK3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.43□□□□□ -0.58
H1fooQ8VIK3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Gm8927-201ENSMUST00000181978 981 ntBASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Gm3222-201ENSMUST00000071282 990 ntBASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H1fooQ8VIK3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms