Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Gm45841-201ENSMUST00000207700 164 ntBASIC14.5□□□□□ -0.09
TraipQ8VIG6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.5□□□□□ -0.09
TraipQ8VIG6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.5□□□□□ -0.09
TraipQ8VIG6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TraipQ8VIG6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Gm12742-201ENSMUST00000117326 410 ntBASIC14.49□□□□□ -0.09
TraipQ8VIG6 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Gm8810-201ENSMUST00000172895 754 ntBASIC14.49□□□□□ -0.09
TraipQ8VIG6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Gm27331-201ENSMUST00000183705 60 ntBASIC14.49□□□□□ -0.09
TraipQ8VIG6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.49□□□□□ -0.09
TraipQ8VIG6 Gm43818-201ENSMUST00000200605 466 ntBASIC14.49□□□□□ -0.09
TraipQ8VIG6 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.49□□□□□ -0.09
TraipQ8VIG6 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.49□□□□□ -0.09
TraipQ8VIG6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TraipQ8VIG6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms