Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh18Q8VHR0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Gm11779-201ENSMUST00000118541 368 ntBASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Gm10275-202ENSMUST00000168697 495 ntBASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Gm10275-201ENSMUST00000092620 635 ntBASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh18Q8VHR0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms