Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Gm24420-201ENSMUST00000176676 59 ntBASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Gm9002-201ENSMUST00000178437 499 ntBASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Gm43094-201ENSMUST00000196549 921 ntBASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ndc1Q8VCB1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Gm43438-201ENSMUST00000198133 379 ntBASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Gm19078-201ENSMUST00000206311 727 ntBASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms