Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Gm15653-201ENSMUST00000119247 907 ntBASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Gm28630-201ENSMUST00000187806 498 ntBASIC13.19□□□□□ -0.3
Rnf8Q8VC56 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.19□□□□□ -0.3
Rnf8Q8VC56 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf8Q8VC56 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Gm14767-201ENSMUST00000121559 586 ntBASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Mir7023-201ENSMUST00000185093 64 ntBASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf8Q8VC56 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Gm13453-201ENSMUST00000118708 357 ntBASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rnf8Q8VC56 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms