Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc58Q8R3Q6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Gm44719-201ENSMUST00000206404 149 ntBASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc58Q8R3Q6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc58Q8R3Q6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms