Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Slf1Q8R3P9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Slf1Q8R3P9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Slf1Q8R3P9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Slf1Q8R3P9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Slf1Q8R3P9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Slf1Q8R3P9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Gm15427-201ENSMUST00000117288 531 ntBASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Gm11779-201ENSMUST00000118541 368 ntBASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Rpph1-201ENSMUST00000175096 319 ntBASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 AW822252-206ENSMUST00000208904 237 ntBASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slf1Q8R3P9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slf1Q8R3P9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slf1Q8R3P9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slf1Q8R3P9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slf1Q8R3P9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slf1Q8R3P9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slf1Q8R3P9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slf1Q8R3P9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Slf1Q8R3P9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Slf1Q8R3P9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Slf1Q8R3P9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Slf1Q8R3P9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slf1Q8R3P9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms