Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.78□□□□□ -0.2
Clip4Q8CI96 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clip4Q8CI96 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clip4Q8CI96 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Clip4Q8CI96 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Clip4Q8CI96 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clip4Q8CI96 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.77□□□□□ -0.21
Clip4Q8CI96 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Gm3436-201ENSMUST00000179930 840 ntBASIC13.77□□□□□ -0.21
Clip4Q8CI96 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.77□□□□□ -0.21
Clip4Q8CI96 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clip4Q8CI96 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Clip4Q8CI96 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Gm27838-201ENSMUST00000184829 128 ntBASIC13.76□□□□□ -0.21
Clip4Q8CI96 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clip4Q8CI96 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.75□□□□□ -0.21
Clip4Q8CI96 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Gm15957-201ENSMUST00000118893 974 ntBASIC13.75□□□□□ -0.21
Clip4Q8CI96 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Gm14719-201ENSMUST00000121891 340 ntBASIC13.75□□□□□ -0.21
Clip4Q8CI96 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.75□□□□□ -0.21
Clip4Q8CI96 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Gm27437-201ENSMUST00000183429 107 ntBASIC13.75□□□□□ -0.21
Clip4Q8CI96 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Gm6916-202ENSMUST00000205523 195 ntBASIC13.75□□□□□ -0.21
Clip4Q8CI96 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.75□□□□□ -0.21
Clip4Q8CI96 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.75□□□□□ -0.21
Clip4Q8CI96 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.75□□□□□ -0.21
Clip4Q8CI96 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms