Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lysmd4Q8CC84 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Gm13015-201ENSMUST00000118674 204 ntBASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Gm18206-201ENSMUST00000207027 926 ntBASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Gm45612-201ENSMUST00000211320 160 ntBASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lysmd4Q8CC84 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lysmd4Q8CC84 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lysmd4Q8CC84 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.21□□□□□ -0.45
Lysmd4Q8CC84 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lysmd4Q8CC84 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lysmd4Q8CC84 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lysmd4Q8CC84 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lysmd4Q8CC84 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms