Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Gm5687-201ENSMUST00000118252 640 ntBASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Gm10268-201ENSMUST00000085340 555 ntBASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm12403-201ENSMUST00000121384 959 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm25261-201ENSMUST00000157416 134 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm16379-201ENSMUST00000161469 348 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm3890-201ENSMUST00000182416 207 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm8762-201ENSMUST00000193486 339 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Col6a6Q8C6K9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Gm15770-201ENSMUST00000117498 584 ntBASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Gm43138-201ENSMUST00000199123 708 ntBASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a6Q8C6K9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Gm14381-201ENSMUST00000122105 414 ntBASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Gm24548-201ENSMUST00000158650 108 ntBASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms