Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm27663-201ENSMUST00000184839 110 ntBASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Gm20949-201ENSMUST00000206478 952 ntBASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Gm9797-201ENSMUST00000052902 613 ntBASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Syt7-204ENSMUST00000223586 1344 ntBASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trub1Q8C0D0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Grk6-205ENSMUST00000224653 2976 ntBASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trub1Q8C0D0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms