Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Gm28760-201ENSMUST00000185995 736 ntBASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.82□□□□□ -0.2
Usp43Q8BUM9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp43Q8BUM9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Gm16215-201ENSMUST00000161990 637 ntBASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Gm43094-201ENSMUST00000196549 921 ntBASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp43Q8BUM9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Usp43Q8BUM9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms