Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Mir449b-201ENSMUST00000104833 80 ntBASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Gm6736-201ENSMUST00000166583 948 ntBASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Gm33320-201ENSMUST00000192232 530 ntBASIC13.2□□□□□ -0.3
Cpne3Q8BT60 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne3Q8BT60 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Grk6-205ENSMUST00000224653 2976 ntBASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms