Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Gm44608-201ENSMUST00000206827 855 ntBASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Gm9229-201ENSMUST00000222777 126 ntBASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Gm27437-201ENSMUST00000183429 107 ntBASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Gm29667-201ENSMUST00000190817 490 ntBASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cpsf4Q8BQZ5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Syt7-204ENSMUST00000223586 1344 ntBASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Gm15321-201ENSMUST00000121290 288 ntBASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Gm16215-201ENSMUST00000161990 637 ntBASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Gm3436-201ENSMUST00000179930 840 ntBASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Gm27838-201ENSMUST00000184829 128 ntBASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms