Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smndc1Q8BGT7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.28□□□□□ -0.28
Smndc1Q8BGT7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smndc1Q8BGT7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smndc1Q8BGT7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smndc1Q8BGT7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.28□□□□□ -0.28
Smndc1Q8BGT7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smndc1Q8BGT7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smndc1Q8BGT7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smndc1Q8BGT7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smndc1Q8BGT7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.28□□□□□ -0.28
Smndc1Q8BGT7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Smndc1Q8BGT7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Smndc1Q8BGT7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smndc1Q8BGT7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.27□□□□□ -0.28
Smndc1Q8BGT7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smndc1Q8BGT7 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smndc1Q8BGT7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smndc1Q8BGT7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smndc1Q8BGT7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smndc1Q8BGT7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Gm10154-201ENSMUST00000084445 354 ntBASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.27□□□□□ -0.29
Smndc1Q8BGT7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smndc1Q8BGT7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smndc1Q8BGT7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smndc1Q8BGT7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smndc1Q8BGT7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smndc1Q8BGT7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms