Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Gm12882-201ENSMUST00000121696 517 ntBASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Samm50Q8BGH2 BC001981-202ENSMUST00000191393 1545 ntBASIC16.02■□□□□ 0.15
Samm50Q8BGH2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Samm50Q8BGH2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Samm50Q8BGH2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Samm50Q8BGH2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Samm50Q8BGH2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Samm50Q8BGH2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Samm50Q8BGH2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Samm50Q8BGH2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Gm12428-201ENSMUST00000119844 727 ntBASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Gm27321-201ENSMUST00000185021 205 ntBASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Samm50Q8BGH2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Samm50Q8BGH2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Samm50Q8BGH2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Samm50Q8BGH2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Samm50Q8BGH2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Samm50Q8BGH2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Samm50Q8BGH2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Samm50Q8BGH2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16■□□□□ 0.15
Samm50Q8BGH2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16■□□□□ 0.15
Samm50Q8BGH2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Samm50Q8BGH2 Gm9229-201ENSMUST00000222777 126 ntBASIC16■□□□□ 0.15
Samm50Q8BGH2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16■□□□□ 0.15
Samm50Q8BGH2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Samm50Q8BGH2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16■□□□□ 0.15
Samm50Q8BGH2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16■□□□□ 0.15
Samm50Q8BGH2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Samm50Q8BGH2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Gm3436-201ENSMUST00000179930 840 ntBASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Samm50Q8BGH2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms