Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.03■□□□□ -0
Usp6nlQ80XC3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.03■□□□□ -0
Usp6nlQ80XC3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Usp6nlQ80XC3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.02■□□□□ -0
Usp6nlQ80XC3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.02■□□□□ -0
Usp6nlQ80XC3 Gm13369-201ENSMUST00000119442 987 ntBASIC15.02■□□□□ -0
Usp6nlQ80XC3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.02■□□□□ -0
Usp6nlQ80XC3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.02■□□□□ -0
Usp6nlQ80XC3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.02■□□□□ -0
Usp6nlQ80XC3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Gm10268-201ENSMUST00000085340 555 ntBASIC15.02■□□□□ -0
Usp6nlQ80XC3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp6nlQ80XC3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Usp6nlQ80XC3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Usp6nlQ80XC3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Usp6nlQ80XC3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Usp6nlQ80XC3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Usp6nlQ80XC3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Usp6nlQ80XC3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Usp6nlQ80XC3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Usp6nlQ80XC3 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.02□□□□□ -0.01
Usp6nlQ80XC3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Usp6nlQ80XC3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Usp6nlQ80XC3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Gm27516-201ENSMUST00000184237 98 ntBASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
Usp6nlQ80XC3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15□□□□□ -0.01
Usp6nlQ80XC3 Gm12020-201ENSMUST00000119030 2042 ntBASIC15□□□□□ -0.01
Usp6nlQ80XC3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Usp6nlQ80XC3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Usp6nlQ80XC3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Usp6nlQ80XC3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms