Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh8Q7TSK3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh8Q7TSK3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh8Q7TSK3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh8Q7TSK3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh8Q7TSK3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh8Q7TSK3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Gm15429-201ENSMUST00000151268 798 ntBASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh8Q7TSK3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh8Q7TSK3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh8Q7TSK3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh8Q7TSK3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh8Q7TSK3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh8Q7TSK3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh8Q7TSK3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh8Q7TSK3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.46□□□□□ -0.26
Pcdh8Q7TSK3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh8Q7TSK3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh8Q7TSK3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh8Q7TSK3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh8Q7TSK3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Gm12485-201ENSMUST00000119641 291 ntBASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Gm6244-201ENSMUST00000178732 841 ntBASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh8Q7TSK3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Mir698-201ENSMUST00000102164 109 ntBASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Mir1894-201ENSMUST00000122802 81 ntBASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms