Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gm20949-201ENSMUST00000206478 952 ntBASIC13.31□□□□□ -0.28
Scn4bQ7M729 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Gm12151-201ENSMUST00000121374 290 ntBASIC13.3□□□□□ -0.28
Scn4bQ7M729 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.3□□□□□ -0.28
Scn4bQ7M729 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.3□□□□□ -0.28
Scn4bQ7M729 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.3□□□□□ -0.28
Scn4bQ7M729 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn4bQ7M729 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.29□□□□□ -0.28
Scn4bQ7M729 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.29□□□□□ -0.28
Scn4bQ7M729 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.29□□□□□ -0.28
Scn4bQ7M729 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Gm10576-201ENSMUST00000191927 825 ntBASIC13.29□□□□□ -0.28
Scn4bQ7M729 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.29□□□□□ -0.28
Scn4bQ7M729 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.29□□□□□ -0.28
Scn4bQ7M729 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn4bQ7M729 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn4bQ7M729 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Scn4bQ7M729 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.28□□□□□ -0.28
Scn4bQ7M729 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn4bQ7M729 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn4bQ7M729 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.28□□□□□ -0.28
Scn4bQ7M729 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.28□□□□□ -0.28
Scn4bQ7M729 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms