Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm13216-201ENSMUST00000117145 591 ntBASIC11.48□□□□□ -0.57
Rif1Q6PR54 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.48□□□□□ -0.57
Rif1Q6PR54 Gm38223-201ENSMUST00000194484 695 ntBASIC11.48□□□□□ -0.57
Rif1Q6PR54 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Gm7848-201ENSMUST00000210739 718 ntBASIC11.47□□□□□ -0.57
Rif1Q6PR54 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.47□□□□□ -0.57
Rif1Q6PR54 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Mir671-201ENSMUST00000102432 98 ntBASIC11.47□□□□□ -0.57
Rif1Q6PR54 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Olfr286-202ENSMUST00000205305 969 ntBASIC11.47□□□□□ -0.57
Rif1Q6PR54 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rif1Q6PR54 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Gm11618-201ENSMUST00000117946 267 ntBASIC11.46□□□□□ -0.57
Rif1Q6PR54 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.46□□□□□ -0.57
Rif1Q6PR54 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.46□□□□□ -0.57
Rif1Q6PR54 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Ntng1-201ENSMUST00000051253 327 ntBASIC11.46□□□□□ -0.57
Rif1Q6PR54 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rif1Q6PR54 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rif1Q6PR54 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rif1Q6PR54 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rif1Q6PR54 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rif1Q6PR54 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rif1Q6PR54 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms