Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShbQ6PD21 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShbQ6PD21 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ShbQ6PD21 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShbQ6PD21 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShbQ6PD21 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShbQ6PD21 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShbQ6PD21 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.52□□□□□ -0.08
ShbQ6PD21 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ShbQ6PD21 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.52□□□□□ -0.08
ShbQ6PD21 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShbQ6PD21 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.52□□□□□ -0.08
ShbQ6PD21 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.52□□□□□ -0.08
ShbQ6PD21 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.52□□□□□ -0.08
ShbQ6PD21 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShbQ6PD21 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ShbQ6PD21 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
ShbQ6PD21 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShbQ6PD21 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShbQ6PD21 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShbQ6PD21 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ShbQ6PD21 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
ShbQ6PD21 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.52□□□□□ -0.09
ShbQ6PD21 Gm13611-201ENSMUST00000118269 318 ntBASIC14.52□□□□□ -0.09
ShbQ6PD21 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.52□□□□□ -0.09
ShbQ6PD21 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.52□□□□□ -0.09
ShbQ6PD21 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ShbQ6PD21 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.52□□□□□ -0.09
ShbQ6PD21 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.52□□□□□ -0.09
ShbQ6PD21 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ShbQ6PD21 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.52□□□□□ -0.09
ShbQ6PD21 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ShbQ6PD21 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ShbQ6PD21 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShbQ6PD21 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.51□□□□□ -0.09
ShbQ6PD21 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.51□□□□□ -0.09
ShbQ6PD21 Gm22121-201ENSMUST00000175148 54 ntBASIC14.51□□□□□ -0.09
ShbQ6PD21 Gm7003-201ENSMUST00000195089 312 ntBASIC14.51□□□□□ -0.09
ShbQ6PD21 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.51□□□□□ -0.09
ShbQ6PD21 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.51□□□□□ -0.09
ShbQ6PD21 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ShbQ6PD21 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ShbQ6PD21 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ShbQ6PD21 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShbQ6PD21 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.5□□□□□ -0.09
ShbQ6PD21 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShbQ6PD21 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShbQ6PD21 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShbQ6PD21 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ShbQ6PD21 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShbQ6PD21 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShbQ6PD21 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.5□□□□□ -0.09
ShbQ6PD21 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShbQ6PD21 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.5□□□□□ -0.09
ShbQ6PD21 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.5□□□□□ -0.09
ShbQ6PD21 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ShbQ6PD21 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.5□□□□□ -0.09
ShbQ6PD21 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.5□□□□□ -0.09
ShbQ6PD21 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.5□□□□□ -0.09
ShbQ6PD21 Gm23699-201ENSMUST00000158835 135 ntBASIC14.5□□□□□ -0.09
ShbQ6PD21 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.5□□□□□ -0.09
ShbQ6PD21 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ShbQ6PD21 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.5□□□□□ -0.09
ShbQ6PD21 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms