Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.5□□□□□ -0.41
VcanQ62059 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VcanQ62059 Gm12165-201ENSMUST00000117047 342 ntBASIC12.5□□□□□ -0.41
VcanQ62059 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.5□□□□□ -0.41
VcanQ62059 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.5□□□□□ -0.41
VcanQ62059 Gm11637-201ENSMUST00000120601 592 ntBASIC12.5□□□□□ -0.41
VcanQ62059 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VcanQ62059 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.5□□□□□ -0.41
VcanQ62059 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.5□□□□□ -0.41
VcanQ62059 Gm44069-201ENSMUST00000204898 506 ntBASIC12.5□□□□□ -0.41
VcanQ62059 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.5□□□□□ -0.41
VcanQ62059 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VcanQ62059 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcanQ62059 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcanQ62059 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcanQ62059 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Gm26956-201ENSMUST00000182176 986 ntBASIC12.49□□□□□ -0.41
VcanQ62059 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.49□□□□□ -0.41
VcanQ62059 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VcanQ62059 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VcanQ62059 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.49□□□□□ -0.41
VcanQ62059 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
VcanQ62059 Gm7541-201ENSMUST00000118361 535 ntBASIC12.49□□□□□ -0.41
VcanQ62059 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VcanQ62059 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.49□□□□□ -0.41
VcanQ62059 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VcanQ62059 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Gm9358-201ENSMUST00000183067 927 ntBASIC12.49□□□□□ -0.41
VcanQ62059 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.49□□□□□ -0.41
VcanQ62059 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.49□□□□□ -0.41
VcanQ62059 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VcanQ62059 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
VcanQ62059 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
VcanQ62059 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Gm18730-201ENSMUST00000218038 343 ntBASIC12.49□□□□□ -0.41
VcanQ62059 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcanQ62059 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.48□□□□□ -0.41
VcanQ62059 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VcanQ62059 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VcanQ62059 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.48□□□□□ -0.41
VcanQ62059 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
VcanQ62059 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Gm37666-201ENSMUST00000194110 866 ntBASIC12.48□□□□□ -0.41
VcanQ62059 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.48□□□□□ -0.41
VcanQ62059 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
VcanQ62059 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.48□□□□□ -0.41
VcanQ62059 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.48□□□□□ -0.41
VcanQ62059 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.48□□□□□ -0.41
VcanQ62059 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.48□□□□□ -0.41
VcanQ62059 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.48□□□□□ -0.41
VcanQ62059 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.48□□□□□ -0.41
VcanQ62059 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.48□□□□□ -0.41
VcanQ62059 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.48□□□□□ -0.41
VcanQ62059 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.48□□□□□ -0.41
VcanQ62059 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VcanQ62059 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcanQ62059 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.47□□□□□ -0.41
VcanQ62059 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.47□□□□□ -0.41
VcanQ62059 Gm14460-201ENSMUST00000121511 639 ntBASIC12.47□□□□□ -0.41
VcanQ62059 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.47□□□□□ -0.41
VcanQ62059 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms