Protein–RNA interactions for Protein: Q61361

Bcan, Brevican core protein, mousemouse

Predictions only

Length 883 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BcanQ61361 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BcanQ61361 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BcanQ61361 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BcanQ61361 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BcanQ61361 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.79■□□□□ 0.28
BcanQ61361 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.79■□□□□ 0.28
BcanQ61361 Gm24196-201ENSMUST00000179161 110 ntBASIC16.79■□□□□ 0.28
BcanQ61361 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BcanQ61361 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.79■□□□□ 0.28
BcanQ61361 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BcanQ61361 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BcanQ61361 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BcanQ61361 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BcanQ61361 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BcanQ61361 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BcanQ61361 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
BcanQ61361 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.79■□□□□ 0.28
BcanQ61361 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.78■□□□□ 0.28
BcanQ61361 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.78■□□□□ 0.28
BcanQ61361 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.78■□□□□ 0.28
BcanQ61361 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
BcanQ61361 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
BcanQ61361 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.78■□□□□ 0.28
BcanQ61361 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.78■□□□□ 0.28
BcanQ61361 Gm18473-201ENSMUST00000220543 868 ntBASIC16.78■□□□□ 0.28
BcanQ61361 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BcanQ61361 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BcanQ61361 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.78■□□□□ 0.28
BcanQ61361 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BcanQ61361 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BcanQ61361 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BcanQ61361 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BcanQ61361 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BcanQ61361 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BcanQ61361 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
BcanQ61361 Gm13392-201ENSMUST00000117708 150 ntBASIC16.77■□□□□ 0.28
BcanQ61361 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.77■□□□□ 0.28
BcanQ61361 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.77■□□□□ 0.28
BcanQ61361 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BcanQ61361 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.77■□□□□ 0.28
BcanQ61361 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.77■□□□□ 0.28
BcanQ61361 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.77■□□□□ 0.28
BcanQ61361 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BcanQ61361 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BcanQ61361 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BcanQ61361 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BcanQ61361 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BcanQ61361 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
BcanQ61361 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BcanQ61361 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
BcanQ61361 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BcanQ61361 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BcanQ61361 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
BcanQ61361 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
BcanQ61361 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BcanQ61361 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.77■□□□□ 0.27
BcanQ61361 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
BcanQ61361 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BcanQ61361 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
BcanQ61361 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
BcanQ61361 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.77■□□□□ 0.27
BcanQ61361 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
BcanQ61361 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
BcanQ61361 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BcanQ61361 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BcanQ61361 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
BcanQ61361 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BcanQ61361 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BcanQ61361 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BcanQ61361 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BcanQ61361 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BcanQ61361 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16.76■□□□□ 0.27
BcanQ61361 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BcanQ61361 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BcanQ61361 Proscos-202ENSMUST00000178990 666 ntBASIC16.76■□□□□ 0.27
BcanQ61361 Gm37424-201ENSMUST00000191727 561 ntBASIC16.76■□□□□ 0.27
BcanQ61361 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BcanQ61361 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.76■□□□□ 0.27
BcanQ61361 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms