Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Gm15770-201ENSMUST00000117498 584 ntBASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Gm15240-201ENSMUST00000118156 720 ntBASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Gm27306-201ENSMUST00000183970 107 ntBASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.16□□□□□ -0.14
Trim38Q5SZ99 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim38Q5SZ99 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Gm44872-201ENSMUST00000207864 420 ntBASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim38Q5SZ99 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.15□□□□□ -0.14
Trim38Q5SZ99 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
Trim38Q5SZ99 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trim38Q5SZ99 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim38Q5SZ99 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms