Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mir8098-201ENSMUST00000184011 137 ntBASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 BC001981-202ENSMUST00000191393 1545 ntBASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.6□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rpph1-201ENSMUST00000175096 319 ntBASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm29310-201ENSMUST00000185468 696 ntBASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm21825-201ENSMUST00000185728 696 ntBASIC10.59□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm29109-201ENSMUST00000185895 696 ntBASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms