Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Gm27646-201ENSMUST00000183989 110 ntBASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Gm3928-201ENSMUST00000121141 1307 ntBASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-3Q5R1C3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms