Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm10290-201ENSMUST00000200451 999 ntBASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Gm45328-201ENSMUST00000210942 917 ntBASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 AC164629.5-201ENSMUST00000220387 632 ntBASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Gm9013-201ENSMUST00000132939 882 ntBASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Olfr286-202ENSMUST00000205305 969 ntBASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Gm43463-201ENSMUST00000195967 1803 ntBASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1brtQ3UNC9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Matn2-203ENSMUST00000226766 3252 ntBASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Mir3081-201ENSMUST00000175305 84 ntBASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC9.75□□□□□ -0.85
Cks1brtQ3UNC9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms