Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Gm42627-201ENSMUST00000197347 224 ntBASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Gm3961-201ENSMUST00000204425 994 ntBASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Gm16372-201ENSMUST00000073088 450 ntBASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upf3aQ3ULJ3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Mir686-201ENSMUST00000102174 109 ntBASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Gm14350-201ENSMUST00000116642 640 ntBASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Gm27516-201ENSMUST00000184237 98 ntBASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Gm38266-201ENSMUST00000194931 421 ntBASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Gm43133-201ENSMUST00000197472 463 ntBASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Gm10146-201ENSMUST00000072739 309 ntBASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.28□□□□□ -0.12
Upf3aQ3ULJ3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upf3aQ3ULJ3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upf3aQ3ULJ3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.27□□□□□ -0.12
Upf3aQ3ULJ3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upf3aQ3ULJ3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Upf3aQ3ULJ3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upf3aQ3ULJ3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upf3aQ3ULJ3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upf3aQ3ULJ3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms