Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Gm13365-201ENSMUST00000121188 973 ntBASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Gm18889-201ENSMUST00000174284 929 ntBASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43aQ3TL54 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Gm27631-201ENSMUST00000184163 466 ntBASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.47□□□□□ -0.09
Trim43aQ3TL54 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Mir125a-201ENSMUST00000083545 68 ntBASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Trim43aQ3TL54 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Gm11745-201ENSMUST00000121669 448 ntBASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Syt7-205ENSMUST00000224135 1557 ntBASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim43aQ3TL54 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Trim43aQ3TL54 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.46□□□□□ -0.1
Trim43aQ3TL54 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim43aQ3TL54 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim43aQ3TL54 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trim43aQ3TL54 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim43aQ3TL54 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trim43aQ3TL54 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms