Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs3Q05895 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs3Q05895 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs3Q05895 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs3Q05895 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs3Q05895 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.99□□□□□ -0.49
Thbs3Q05895 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs3Q05895 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs3Q05895 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Thbs3Q05895 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs3Q05895 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.98□□□□□ -0.49
Thbs3Q05895 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.98□□□□□ -0.49
Thbs3Q05895 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Thbs3Q05895 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.98□□□□□ -0.49
Thbs3Q05895 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.98□□□□□ -0.49
Thbs3Q05895 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.98□□□□□ -0.49
Thbs3Q05895 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Thbs3Q05895 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Thbs3Q05895 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Thbs3Q05895 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Thbs3Q05895 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.98□□□□□ -0.49
Thbs3Q05895 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.98□□□□□ -0.49
Thbs3Q05895 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Thbs3Q05895 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs3Q05895 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Thbs3Q05895 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Thbs3Q05895 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.97□□□□□ -0.49
Thbs3Q05895 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.97□□□□□ -0.49
Thbs3Q05895 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.97□□□□□ -0.49
Thbs3Q05895 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.97□□□□□ -0.49
Thbs3Q05895 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Thbs3Q05895 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Thbs3Q05895 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.97□□□□□ -0.49
Thbs3Q05895 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.97□□□□□ -0.49
Thbs3Q05895 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.97□□□□□ -0.49
Thbs3Q05895 Gm27437-201ENSMUST00000183429 107 ntBASIC11.97□□□□□ -0.49
Thbs3Q05895 Gm44855-201ENSMUST00000205725 362 ntBASIC11.97□□□□□ -0.49
Thbs3Q05895 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.97□□□□□ -0.49
Thbs3Q05895 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.97□□□□□ -0.49
Thbs3Q05895 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.97□□□□□ -0.49
Thbs3Q05895 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Thbs3Q05895 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.97□□□□□ -0.49
Thbs3Q05895 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Thbs3Q05895 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Thbs3Q05895 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Thbs3Q05895 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Thbs3Q05895 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Thbs3Q05895 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Thbs3Q05895 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Thbs3Q05895 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Thbs3Q05895 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Thbs3Q05895 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Thbs3Q05895 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Thbs3Q05895 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Thbs3Q05895 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Thbs3Q05895 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Thbs3Q05895 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Thbs3Q05895 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Thbs3Q05895 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.96□□□□□ -0.49
Thbs3Q05895 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms