Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.23□□□□□ -0.29
Msx2Q03358 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx2Q03358 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Msx2Q03358 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx2Q03358 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx2Q03358 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx2Q03358 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Msx2Q03358 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Msx2Q03358 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Msx2Q03358 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.22□□□□□ -0.29
Msx2Q03358 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Msx2Q03358 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Msx2Q03358 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.22□□□□□ -0.29
Msx2Q03358 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.22□□□□□ -0.29
Msx2Q03358 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Msx2Q03358 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.22□□□□□ -0.29
Msx2Q03358 Gm29310-201ENSMUST00000185468 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21825-201ENSMUST00000185728 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm29109-201ENSMUST00000185895 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21896-201ENSMUST00000186520 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21873-201ENSMUST00000186728 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21794-201ENSMUST00000187056 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21880-201ENSMUST00000187275 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21826-201ENSMUST00000187451 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21198-201ENSMUST00000188393 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21749-201ENSMUST00000189343 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21901-201ENSMUST00000189568 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm29424-201ENSMUST00000189716 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm28599-201ENSMUST00000189838 694 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21867-201ENSMUST00000189917 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm29269-201ENSMUST00000190087 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21722-201ENSMUST00000190153 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm28423-201ENSMUST00000190701 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21899-201ENSMUST00000190745 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21910-201ENSMUST00000191163 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21849-201ENSMUST00000191571 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm28678-201ENSMUST00000191593 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm20910-201ENSMUST00000193268 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm21871-201ENSMUST00000194621 696 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Gm18195-201ENSMUST00000207604 706 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.22□□□□□ -0.29
Msx2Q03358 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.22□□□□□ -0.29
Msx2Q03358 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Msx2Q03358 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx2Q03358 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Msx2Q03358 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.21□□□□□ -0.29
Msx2Q03358 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.21□□□□□ -0.29
Msx2Q03358 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.21□□□□□ -0.29
Msx2Q03358 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.21□□□□□ -0.29
Msx2Q03358 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx2Q03358 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.21□□□□□ -0.29
Msx2Q03358 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Msx2Q03358 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Msx2Q03358 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Msx2Q03358 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms