Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.61□□□□□ -0.23
Col6a2Q02788 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.61□□□□□ -0.23
Col6a2Q02788 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col6a2Q02788 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Gm27892-201ENSMUST00000185017 106 ntBASIC13.61□□□□□ -0.23
Col6a2Q02788 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col6a2Q02788 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col6a2Q02788 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col6a2Q02788 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col6a2Q02788 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.61□□□□□ -0.23
Col6a2Q02788 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Col6a2Q02788 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Col6a2Q02788 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.61□□□□□ -0.23
Col6a2Q02788 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Col6a2Q02788 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a2Q02788 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Col6a2Q02788 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.6□□□□□ -0.23
Col6a2Q02788 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.6□□□□□ -0.23
Col6a2Q02788 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col6a2Q02788 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col6a2Q02788 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Gm12928-201ENSMUST00000117115 573 ntBASIC13.6□□□□□ -0.23
Col6a2Q02788 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.6□□□□□ -0.23
Col6a2Q02788 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.6□□□□□ -0.23
Col6a2Q02788 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.6□□□□□ -0.23
Col6a2Q02788 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.6□□□□□ -0.23
Col6a2Q02788 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.6□□□□□ -0.23
Col6a2Q02788 Gm6244-201ENSMUST00000178732 841 ntBASIC13.6□□□□□ -0.23
Col6a2Q02788 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.6□□□□□ -0.23
Col6a2Q02788 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.6□□□□□ -0.23
Col6a2Q02788 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Col6a2Q02788 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.6□□□□□ -0.23
Col6a2Q02788 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col6a2Q02788 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Gm5161-201ENSMUST00000075243 853 ntBASIC13.6□□□□□ -0.23
Col6a2Q02788 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Col6a2Q02788 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Col6a2Q02788 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.6□□□□□ -0.23
Col6a2Q02788 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a2Q02788 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col6a2Q02788 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col6a2Q02788 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.59□□□□□ -0.23
Col6a2Q02788 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col6a2Q02788 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col6a2Q02788 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Gm27839-201ENSMUST00000184242 106 ntBASIC13.59□□□□□ -0.23
Col6a2Q02788 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Gm38223-201ENSMUST00000194484 695 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms