Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.91□□□□□ -0.34
Nkx3-2P97503 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.91□□□□□ -0.34
Nkx3-2P97503 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.91□□□□□ -0.34
Nkx3-2P97503 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Gm15806-201ENSMUST00000120696 955 ntBASIC12.91□□□□□ -0.34
Nkx3-2P97503 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Gm27772-201ENSMUST00000184900 187 ntBASIC12.91□□□□□ -0.34
Nkx3-2P97503 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx3-2P97503 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Gm12138-201ENSMUST00000122180 951 ntBASIC12.9□□□□□ -0.34
Nkx3-2P97503 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.9□□□□□ -0.34
Nkx3-2P97503 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx3-2P97503 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.9□□□□□ -0.34
Nkx3-2P97503 Gm43433-201ENSMUST00000196573 481 ntBASIC12.9□□□□□ -0.34
Nkx3-2P97503 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.9□□□□□ -0.34
Nkx3-2P97503 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.9□□□□□ -0.34
Nkx3-2P97503 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nkx3-2P97503 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nkx3-2P97503 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.89□□□□□ -0.35
Nkx3-2P97503 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms