Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Vps45P97390 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vps45P97390 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Gm15240-201ENSMUST00000118156 720 ntBASIC14.1□□□□□ -0.15
Vps45P97390 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Mir1982-201ENSMUST00000157368 74 ntBASIC14.1□□□□□ -0.15
Vps45P97390 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Vps45P97390 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.1□□□□□ -0.15
Vps45P97390 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.1□□□□□ -0.15
Vps45P97390 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.1□□□□□ -0.15
Vps45P97390 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vps45P97390 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.1□□□□□ -0.15
Vps45P97390 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vps45P97390 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps45P97390 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Vps45P97390 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vps45P97390 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vps45P97390 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Matn2-206ENSMUST00000228570 2798 ntBASIC14.09□□□□□ -0.15
Vps45P97390 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.09□□□□□ -0.15
Vps45P97390 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vps45P97390 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps45P97390 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps45P97390 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.09□□□□□ -0.15
Vps45P97390 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.09□□□□□ -0.15
Vps45P97390 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vps45P97390 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.09□□□□□ -0.15
Vps45P97390 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Vps45P97390 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.09□□□□□ -0.15
Vps45P97390 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps45P97390 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vps45P97390 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vps45P97390 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Vps45P97390 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps45P97390 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.08□□□□□ -0.15
Vps45P97390 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.08□□□□□ -0.16
Vps45P97390 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Vps45P97390 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Gm28911-201ENSMUST00000188837 117 ntBASIC14.08□□□□□ -0.16
Vps45P97390 Gm5425-201ENSMUST00000214125 459 ntBASIC14.08□□□□□ -0.16
Vps45P97390 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Vps45P97390 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.08□□□□□ -0.16
Vps45P97390 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps45P97390 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vps45P97390 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms