Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Gm8793-201ENSMUST00000183069 1303 ntBASIC17.02■□□□□ 0.32
Nkx2-3P97334 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.02■□□□□ 0.32
Nkx2-3P97334 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Gm29396-201ENSMUST00000185659 716 ntBASIC17.02■□□□□ 0.32
Nkx2-3P97334 Gm5896-201ENSMUST00000189662 1024 ntBASIC17.02■□□□□ 0.32
Nkx2-3P97334 Gm6621-201ENSMUST00000193251 772 ntBASIC17.02■□□□□ 0.32
Nkx2-3P97334 Gm3961-201ENSMUST00000204425 994 ntBASIC17.02■□□□□ 0.32
Nkx2-3P97334 Gm10608-202ENSMUST00000213924 676 ntBASIC17.02■□□□□ 0.32
Nkx2-3P97334 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx2-3P97334 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Nkx2-3P97334 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx2-3P97334 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Nkx2-3P97334 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Nkx2-3P97334 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx2-3P97334 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx2-3P97334 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx2-3P97334 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx2-3P97334 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx2-3P97334 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx2-3P97334 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Gm16202-201ENSMUST00000117532 544 ntBASIC17.01■□□□□ 0.31
Nkx2-3P97334 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Gm11978-201ENSMUST00000122315 466 ntBASIC17.01■□□□□ 0.31
Nkx2-3P97334 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC17.01■□□□□ 0.31
Nkx2-3P97334 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.01■□□□□ 0.31
Nkx2-3P97334 Gm38266-201ENSMUST00000194931 421 ntBASIC17.01■□□□□ 0.31
Nkx2-3P97334 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nkx2-3P97334 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Nkx2-3P97334 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Nkx2-3P97334 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC17■□□□□ 0.31
Nkx2-3P97334 Gm2231-201ENSMUST00000125661 612 ntBASIC17■□□□□ 0.31
Nkx2-3P97334 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Nkx2-3P97334 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Nkx2-3P97334 Gm42627-201ENSMUST00000197347 224 ntBASIC17■□□□□ 0.31
Nkx2-3P97334 Gm7118-201ENSMUST00000200167 1003 ntBASIC17■□□□□ 0.31
Nkx2-3P97334 Gm9368-201ENSMUST00000219348 831 ntBASIC17■□□□□ 0.31
Nkx2-3P97334 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17■□□□□ 0.31
Nkx2-3P97334 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Gm16372-201ENSMUST00000073088 450 ntBASIC17■□□□□ 0.31
Nkx2-3P97334 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms