Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Gm14127-201ENSMUST00000117906 678 ntBASIC14.75□□□□□ -0.05
CiitaP79621 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.75□□□□□ -0.05
CiitaP79621 Gm6152-201ENSMUST00000151704 340 ntBASIC14.75□□□□□ -0.05
CiitaP79621 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Gm27486-201ENSMUST00000184923 80 ntBASIC14.75□□□□□ -0.05
CiitaP79621 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CiitaP79621 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.75□□□□□ -0.05
CiitaP79621 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CiitaP79621 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CiitaP79621 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.74□□□□□ -0.05
CiitaP79621 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.74□□□□□ -0.05
CiitaP79621 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.74□□□□□ -0.05
CiitaP79621 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CiitaP79621 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.74□□□□□ -0.05
CiitaP79621 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CiitaP79621 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.74□□□□□ -0.05
CiitaP79621 Gm26315-201ENSMUST00000083890 321 ntBASIC14.74□□□□□ -0.05
CiitaP79621 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.74□□□□□ -0.05
CiitaP79621 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CiitaP79621 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
CiitaP79621 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.74□□□□□ -0.05
CiitaP79621 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CiitaP79621 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CiitaP79621 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.73□□□□□ -0.05
CiitaP79621 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.73□□□□□ -0.05
CiitaP79621 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CiitaP79621 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.73□□□□□ -0.05
CiitaP79621 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.73□□□□□ -0.05
CiitaP79621 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.73□□□□□ -0.05
CiitaP79621 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.73□□□□□ -0.05
CiitaP79621 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CiitaP79621 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.73□□□□□ -0.05
CiitaP79621 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.73□□□□□ -0.05
CiitaP79621 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CiitaP79621 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.73□□□□□ -0.05
CiitaP79621 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Gm38671-201ENSMUST00000200573 130 ntBASIC14.73□□□□□ -0.05
CiitaP79621 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.73□□□□□ -0.05
CiitaP79621 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.73□□□□□ -0.05
CiitaP79621 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CiitaP79621 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CiitaP79621 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CiitaP79621 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.73□□□□□ -0.05
CiitaP79621 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms