Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Hmgb1P63158 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Gm13385-201ENSMUST00000121089 220 ntBASIC15.03■□□□□ -0
Hmgb1P63158 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.03■□□□□ -0
Hmgb1P63158 Gm24420-201ENSMUST00000176676 59 ntBASIC15.03■□□□□ -0
Hmgb1P63158 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.03■□□□□ -0
Hmgb1P63158 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.03■□□□□ -0
Hmgb1P63158 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Hmgb1P63158 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Hmgb1P63158 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Hmgb1P63158 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Hmgb1P63158 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgb1P63158 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.03■□□□□ -0
Hmgb1P63158 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.03■□□□□ -0
Hmgb1P63158 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgb1P63158 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgb1P63158 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Hmgb1P63158 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgb1P63158 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Hmgb1P63158 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgb1P63158 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.02■□□□□ -0
Hmgb1P63158 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hmgb1P63158 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.02■□□□□ -0
Hmgb1P63158 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgb1P63158 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgb1P63158 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgb1P63158 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.02■□□□□ -0
Hmgb1P63158 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgb1P63158 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hmgb1P63158 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Hmgb1P63158 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgb1P63158 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgb1P63158 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Hmgb1P63158 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.02■□□□□ -0
Hmgb1P63158 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Hmgb1P63158 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgb1P63158 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.02■□□□□ -0
Hmgb1P63158 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.02■□□□□ -0
Hmgb1P63158 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.02■□□□□ -0
Hmgb1P63158 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Hmgb1P63158 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgb1P63158 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgb1P63158 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgb1P63158 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgb1P63158 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Hmgb1P63158 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgb1P63158 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgb1P63158 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgb1P63158 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgb1P63158 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgb1P63158 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgb1P63158 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgb1P63158 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgb1P63158 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgb1P63158 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.02□□□□□ -0.01
Hmgb1P63158 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Hmgb1P63158 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Hmgb1P63158 Gm26308-201ENSMUST00000157768 69 ntBASIC15.01□□□□□ -0.01
Hmgb1P63158 Gm3436-201ENSMUST00000179930 840 ntBASIC15.01□□□□□ -0.01
Hmgb1P63158 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Hmgb1P63158 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Hmgb1P63158 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.01□□□□□ -0.01
Hmgb1P63158 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb1P63158 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms