Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Tpm1P58771 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.2■□□□□ 0.02
Tpm1P58771 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.2■□□□□ 0.02
Tpm1P58771 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 AA619741-201ENSMUST00000195095 646 ntBASIC15.2■□□□□ 0.02
Tpm1P58771 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.2■□□□□ 0.02
Tpm1P58771 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Tpm1P58771 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Tpm1P58771 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Tpm1P58771 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Tpm1P58771 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tpm1P58771 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm1P58771 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.19■□□□□ 0.02
Tpm1P58771 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tpm1P58771 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Tpm1P58771 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.19■□□□□ 0.02
Tpm1P58771 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tpm1P58771 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.19■□□□□ 0.02
Tpm1P58771 Psmb5-202ENSMUST00000227257 622 ntBASIC15.19■□□□□ 0.02
Tpm1P58771 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tpm1P58771 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Tpm1P58771 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm1P58771 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.18■□□□□ 0.02
Tpm1P58771 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.18■□□□□ 0.02
Tpm1P58771 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tpm1P58771 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.18■□□□□ 0.02
Tpm1P58771 Gm17271-201ENSMUST00000165535 355 ntBASIC15.18■□□□□ 0.02
Tpm1P58771 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Gm18733-201ENSMUST00000173950 856 ntBASIC15.18■□□□□ 0.02
Tpm1P58771 Gm29741-201ENSMUST00000192667 421 ntBASIC15.18■□□□□ 0.02
Tpm1P58771 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.18■□□□□ 0.02
Tpm1P58771 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.18■□□□□ 0.02
Tpm1P58771 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.18■□□□□ 0.02
Tpm1P58771 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
Tpm1P58771 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.18■□□□□ 0.02
Tpm1P58771 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Tpm1P58771 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Tpm1P58771 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.18■□□□□ 0.02
Tpm1P58771 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Tpm1P58771 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm1P58771 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms