Protein–RNA interactions for Protein: P58404

Strn4, Striatin-4, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Strn4P58404 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Strn4P58404 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.12■□□□□ 0.33
Strn4P58404 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Strn4P58404 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Strn4P58404 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Strn4P58404 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Strn4P58404 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Strn4P58404 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Strn4P58404 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Strn4P58404 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Strn4P58404 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Strn4P58404 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Strn4P58404 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Strn4P58404 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.11■□□□□ 0.33
Strn4P58404 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Gm1335-201ENSMUST00000121653 386 ntBASIC17.11■□□□□ 0.33
Strn4P58404 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.11■□□□□ 0.33
Strn4P58404 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Gm45930-201ENSMUST00000221330 292 ntBASIC17.11■□□□□ 0.33
Strn4P58404 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.11■□□□□ 0.33
Strn4P58404 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Strn4P58404 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Strn4P58404 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.11■□□□□ 0.33
Strn4P58404 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Strn4P58404 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Strn4P58404 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Strn4P58404 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Strn4P58404 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Strn4P58404 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.1■□□□□ 0.33
Strn4P58404 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.1■□□□□ 0.33
Strn4P58404 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.1■□□□□ 0.33
Strn4P58404 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.1■□□□□ 0.33
Strn4P58404 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.1■□□□□ 0.33
Strn4P58404 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.1■□□□□ 0.33
Strn4P58404 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Strn4P58404 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Strn4P58404 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Strn4P58404 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Gm22018-201ENSMUST00000104357 131 ntBASIC17.09■□□□□ 0.33
Strn4P58404 Gm13369-201ENSMUST00000119442 987 ntBASIC17.09■□□□□ 0.33
Strn4P58404 Gm10156-201ENSMUST00000122364 462 ntBASIC17.09■□□□□ 0.33
Strn4P58404 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.09■□□□□ 0.33
Strn4P58404 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.09■□□□□ 0.33
Strn4P58404 Gm27682-201ENSMUST00000183930 110 ntBASIC17.09■□□□□ 0.33
Strn4P58404 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Gm24526-201ENSMUST00000082921 158 ntBASIC17.09■□□□□ 0.33
Strn4P58404 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Strn4P58404 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.09■□□□□ 0.33
Strn4P58404 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Strn4P58404 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Strn4P58404 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Strn4P58404 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Strn4P58404 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Strn4P58404 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms