Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Abcd3P55096 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Abcd3P55096 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Abcd3P55096 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Abcd3P55096 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.22□□□□□ -0.45
Abcd3P55096 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Abcd3P55096 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.22□□□□□ -0.45
Abcd3P55096 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.22□□□□□ -0.45
Abcd3P55096 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.22□□□□□ -0.45
Abcd3P55096 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.22□□□□□ -0.45
Abcd3P55096 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.22□□□□□ -0.45
Abcd3P55096 Gm27306-201ENSMUST00000183970 107 ntBASIC12.22□□□□□ -0.45
Abcd3P55096 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.22□□□□□ -0.45
Abcd3P55096 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.22□□□□□ -0.45
Abcd3P55096 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.22□□□□□ -0.45
Abcd3P55096 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Abcd3P55096 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Abcd3P55096 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.22□□□□□ -0.45
Abcd3P55096 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.22□□□□□ -0.45
Abcd3P55096 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Abcd3P55096 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.22□□□□□ -0.45
Abcd3P55096 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abcd3P55096 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.21□□□□□ -0.45
Abcd3P55096 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.21□□□□□ -0.45
Abcd3P55096 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Abcd3P55096 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
Abcd3P55096 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Abcd3P55096 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Gm15770-201ENSMUST00000117498 584 ntBASIC12.21□□□□□ -0.45
Abcd3P55096 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Gm18905-201ENSMUST00000205454 928 ntBASIC12.21□□□□□ -0.45
Abcd3P55096 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Abcd3P55096 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Abcd3P55096 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abcd3P55096 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Abcd3P55096 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.21□□□□□ -0.46
Abcd3P55096 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Abcd3P55096 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Abcd3P55096 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Abcd3P55096 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Abcd3P55096 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Abcd3P55096 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Abcd3P55096 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Abcd3P55096 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Abcd3P55096 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abcd3P55096 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abcd3P55096 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abcd3P55096 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Abcd3P55096 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abcd3P55096 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abcd3P55096 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abcd3P55096 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.2□□□□□ -0.46
Abcd3P55096 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abcd3P55096 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Abcd3P55096 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abcd3P55096 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Abcd3P55096 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.2□□□□□ -0.46
Abcd3P55096 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abcd3P55096 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abcd3P55096 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.2□□□□□ -0.46
Abcd3P55096 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abcd3P55096 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.2□□□□□ -0.46
Abcd3P55096 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms