Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.86□□□□□ -0.19
Sox1P53783 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Sox1P53783 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.86□□□□□ -0.19
Sox1P53783 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sox1P53783 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.86□□□□□ -0.19
Sox1P53783 Gm5070-201ENSMUST00000177599 862 ntBASIC13.86□□□□□ -0.19
Sox1P53783 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.86□□□□□ -0.19
Sox1P53783 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Gm5781-201ENSMUST00000219792 443 ntBASIC13.86□□□□□ -0.19
Sox1P53783 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.86□□□□□ -0.19
Sox1P53783 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sox1P53783 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Sox1P53783 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox1P53783 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sox1P53783 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sox1P53783 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Sox1P53783 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.85□□□□□ -0.19
Sox1P53783 Gm15131-201ENSMUST00000119124 595 ntBASIC13.85□□□□□ -0.19
Sox1P53783 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.85□□□□□ -0.19
Sox1P53783 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.85□□□□□ -0.19
Sox1P53783 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.85□□□□□ -0.19
Sox1P53783 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.85□□□□□ -0.19
Sox1P53783 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.85□□□□□ -0.19
Sox1P53783 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.85□□□□□ -0.19
Sox1P53783 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Sox1P53783 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.85□□□□□ -0.19
Sox1P53783 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Sox1P53783 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.85□□□□□ -0.19
Sox1P53783 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sox1P53783 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox1P53783 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.84□□□□□ -0.19
Sox1P53783 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sox1P53783 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.84□□□□□ -0.19
Sox1P53783 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.84□□□□□ -0.19
Sox1P53783 Gm19459-201ENSMUST00000176240 835 ntBASIC13.84□□□□□ -0.19
Sox1P53783 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.84□□□□□ -0.19
Sox1P53783 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms